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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015907827.1_cds_XP_016457929.1_51604
CDS Infomation

[gene=LOC107781704] [db_xref=GeneID:107781704] [protein=caffeic acid 3-O-methyltransferase-like] [protein_id=XP_016457929.1] [location=join(10505..10911,11038..11053,11094..11473,13565..13656,14622..14686,15005..15304)] [gbkey=CDS]
Sequence

ATGGCTTCATCCATGGATAAAATTGTTATATCCAATGAAGAGGAAAATTCAATGATGAAG
GCTATGCATCTTCCTACTGGTTTAATCCTTAACATGGTTTTGAAAGCTGTCATAGAACTT
GGCTTGTTTGAGATCATAGCAAAAGCAAATAGTCAATTATCCTCCTATGATATTGCATCT
CAACTTCCCACAAAAAACCCTAAAGCCCCACTTGTTCTTGAAAGGATTCTAAGCTTTCTT
GCTAGCCAATCTTTTCTCACTTCCAACATTTCCAAGGATGATGATGGAAAAATTCACACA
TCATACAATTTGACACCTTTGAGCAAGAGTTTAATATCCGATAAAGACGGATCATCTTTT
GCTTCCTTTTTACTTTTGGCTACTGATCGAGTAGCTGTTAATTCCTATTTTTGTATATTG
TTAATCTATGTTGATTGGATATATTTTGACTTCTTGTTAAGGATTCATTTGAAAGATGCA
ATTCTAGAGGGTAAAATACCATTCAACAAGGCTCACGGAATGCATAAATTTGGATACCAT
GGAAAAGATAGTAGATTCAATATGGTGTTCAATAAAGCTATGCAAAACATCTCTTCCATT
GAAATGAAGAGAATTCTTGAGTCTTACACTGGCTTCCAAGGAGTAAAAGAGGTCATAGAT
GTGGGAGGTGGACTTGGGGTATCATTAGCTTCTATAATTTCCAAGTATCCTAATATCAAG
GGTATTAATTTTGACCTACCCCATGTCATCAACCATGCAGGTAATTTATTTCCCTTAATT
ACTCAGGGCTTTTTTCACTTTTACTCTACGCTTAGAGCAAACGCGTGGCCCAGCTTCCTC
TCAAGTTCCCCTATGCGAACGCGGCATCTCCCACCCGTTCGCATAGCACAGACTGGCATA
GAGCATGTTGGAGGAGATATGTTTAAGAGCGTTCCTAAAGGGGAGGTAATCATTCTCAAG
GCGATACTTCATGATTGGGATGATGACCATTGCCTGAAAATTTTGAAGAATTGTTGGGGA
GCTTTACCAGAAAATGGTAAGGTTGTGGTAATAGAACAAATACAGCTAGAATATCCAGAG
ACTAATCTTCTCTCTAAGCATTCATTTGGTACTGATATGTTAATGATTACTGTGTTTAAT
GGAGGGAAAGAAAGAACAAAGCAAGAATTTGAAGCTTTAGCAAAAGAAGCTGGATTTTCT
GCTCTCAAAATTGCATGTCGTGCATATTATTGTTGGGTCATGGAATTGTACAAATGTTAA

Peptide Sequence

PEP ID

XP_016457929.1
PEP Infomation

PREDICTED: caffeic acid 3-O-methyltransferase-like [Nicotiana tabacum]
Sequence

MASSMDKIVISNEEENSMMKAMHLPTGLILNMVLKAVIELGLFEIIAKANSQLSSYDIAS
QLPTKNPKAPLVLERILSFLASQSFLTSNISKDDDGKIHTSYNLTPLSKSLISDKDGSSF
ASFLLLATDRVAVNSYFCILLIYVDWIYFDFLLRIHLKDAILEGKIPFNKAHGMHKFGYH
GKDSRFNMVFNKAMQNISSIEMKRILESYTGFQGVKEVIDVGGGLGVSLASIISKYPNIK
GINFDLPHVINHAGNLFPLITQGFFHFYSTLRANAWPSFLSSSPMRTRHLPPVRIAQTGI
EHVGGDMFKSVPKGEVIILKAILHDWDDDHCLKILKNCWGALPENGKVVVIEQIQLEYPE
TNLLSKHSFGTDMLMITVFNGGKERTKQEFEALAKEAGFSALKIACRAYYCWVMELYKC

Transcript Sequence

Gene sequence data has not been registered.